Fix java missing dep detection

Review Request #1759 — Created Feb. 12, 2015 and discarded — Latest diff uploaded

patricklaw
pants
pants-reviews
benjyw, ity, jsirois, zundel
Fix java missing dep detection

This is a "WIP" even though we have it patched in internally, so I'm quite sure it works. I want to backstop this with tests though. The way these products are passed around also needs to be rethought in the new world of round engine.

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